program version 3.1.4 Search Results


90
OpenClinica LLC open source software version 3.14
Open Source Software Version 3.14, supplied by OpenClinica LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/open source software version 3.14/product/OpenClinica LLC
Average 90 stars, based on 1 article reviews
open source software version 3.14 - by Bioz Stars, 2026-06
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90
GraphPad Software Inc prism version 6.07
Prism Version 6.07, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/prism version 6.07/product/GraphPad Software Inc
Average 90 stars, based on 1 article reviews
prism version 6.07 - by Bioz Stars, 2026-06
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86
Noraxon Inc myomotion analysis software
Myomotion Analysis Software, supplied by Noraxon Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/myomotion analysis software/product/Noraxon Inc
Average 86 stars, based on 1 article reviews
myomotion analysis software - by Bioz Stars, 2026-06
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86
Kratos Solutions casaxps version 2 3 14 software
Casaxps Version 2 3 14 Software, supplied by Kratos Solutions, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/casaxps version 2 3 14 software/product/Kratos Solutions
Average 86 stars, based on 1 article reviews
casaxps version 2 3 14 software - by Bioz Stars, 2026-06
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90
Carl Zeiss lsm 710 confocal microscope
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Lsm 710 Confocal Microscope, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/lsm 710 confocal microscope/product/Carl Zeiss
Average 90 stars, based on 1 article reviews
lsm 710 confocal microscope - by Bioz Stars, 2026-06
90/100 stars
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95
Bruker Corporation ontrol semi quantitative xrf software
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Ontrol Semi Quantitative Xrf Software, supplied by Bruker Corporation, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ontrol semi quantitative xrf software/product/Bruker Corporation
Average 95 stars, based on 1 article reviews
ontrol semi quantitative xrf software - by Bioz Stars, 2026-06
95/100 stars
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90
NordicNeuroLab AS nordicice software
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Nordicice Software, supplied by NordicNeuroLab AS, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nordicice software/product/NordicNeuroLab AS
Average 90 stars, based on 1 article reviews
nordicice software - by Bioz Stars, 2026-06
90/100 stars
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99
DNASTAR megalign software
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Megalign Software, supplied by DNASTAR, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/megalign software/product/DNASTAR
Average 99 stars, based on 1 article reviews
megalign software - by Bioz Stars, 2026-06
99/100 stars
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90
NextMove Software leadmine version 3.14.1
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Leadmine Version 3.14.1, supplied by NextMove Software, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/leadmine version 3.14.1/product/NextMove Software
Average 90 stars, based on 1 article reviews
leadmine version 3.14.1 - by Bioz Stars, 2026-06
90/100 stars
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86
Syngene gene tool software version 4 3 14 0
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Gene Tool Software Version 4 3 14 0, supplied by Syngene, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/gene tool software version 4 3 14 0/product/Syngene
Average 86 stars, based on 1 article reviews
gene tool software version 4 3 14 0 - by Bioz Stars, 2026-06
86/100 stars
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90
wavemetrics inc igor pro
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Igor Pro, supplied by wavemetrics inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/igor pro/product/wavemetrics inc
Average 90 stars, based on 1 article reviews
igor pro - by Bioz Stars, 2026-06
90/100 stars
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90
FUJIFILM fla-3000 scanner
(A) Flattened Z-stack through myenteric plexus <t>(10x</t> objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with <t>20x</t> objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.
Fla 3000 Scanner, supplied by FUJIFILM, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/fla-3000 scanner/product/FUJIFILM
Average 90 stars, based on 1 article reviews
fla-3000 scanner - by Bioz Stars, 2026-06
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Image Search Results


(A) Flattened Z-stack through myenteric plexus (10x objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with 20x objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.

Journal: Gastroenterology

Article Title: Robust, 3-Dimensional Visualization of Human Colon Enteric Nervous System Without Tissue Sectioning

doi: 10.1053/j.gastro.2020.02.035

Figure Lengend Snippet: (A) Flattened Z-stack through myenteric plexus (10x objective, stitched fields, 4x5mm2). Small clustered ganglia have HuC/D+ (green) and PHOX2B+ (blue) neurons. Nerve fibers are visualized via glial S100β (red). Myenteric plexus and ganglia within plexus were outlined manually (thin yellow lines). (B) Quantitative data from 4x5mm2 images like (A). (C,D) Flattened Z-stack from colon myenteric ganglia (left (C) or right (D)) stained for HuC/D (green), S100β (red) and PHOX2B (blue) imaged with 20x objective. Table to right of each image shows quantitative data from that specific Z-stack. (E) Quantitative data from 4 right colon, 5 fields/subject; 3 left colon, 5 fields/subject; 1 left colon, 4 fields; Total neurons counted: 1953 right colon, 2603 left colon; Total glia counted: 8021 right colon, 6423 left colon. Single ganglion areas are from 24 right and 19 left colon ganglia. Cells/mm2 within these ganglia are based on 5261 neurons and 16,915 glia. (F,G,H) Colon stained with HuC/D (green), S100β (red), and PHOX2B (blue) antibodies. PHOX2B+ nuclei include all myenteric neurons and glia within myenteric ganglia (G). Glia in longitudinal (F) and circular muscle (H) were not PHOX2B immunoreactive. (A) Scale bar = 1000μm. (C,D) Scale bar=350μm. (F-H) Scale bar=50μm.

Article Snippet: Zeiss LSM 710 confocal microscope (10x and 20x Plan-Apochromat objectives, Zeiss Zen software (version 2.3 14.0.14.201)) Z-axis increments were 4μm (10x objective) or 1μm (20x objective).

Techniques: Staining

(A, B) Three-dimensional ganglia volumes (yellow regions) (Supplemental Videos 5 and 6 are from these regions). To right of each image are quantitative data from that specific region. (C) Cell density based on five 20x fields/subject, 8 subjects (4 left, 4 right colon)), 24 right and 19 left colon ganglia volumes, 5261 neurons and 16,915 glial cells. (D-M) Manual neuron and glia counts were obtained after HuC/D (blue), S100β (green) and PHOX2B (red) staining. (D,I) Flattened Z-stacks. (E-H,J-M) Single slices and channels from Z-stack. (N,O) To estimate cell density over large regions we multiplied density within small regions (like Figure 2C) by percentage of bowel with myenteric plexus (using images like 2A). We found little variability in cell density within ganglia, indicated by tight data clusters in individuals. Inter-individual differences primarily reflect percentage of bowel occupied by ganglia in each individual. (A,B,D,I) Scale bars=100 μm. (E,F,G,H,J,K,L,M) Use (E) scale bar=25 μm.

Journal: Gastroenterology

Article Title: Robust, 3-Dimensional Visualization of Human Colon Enteric Nervous System Without Tissue Sectioning

doi: 10.1053/j.gastro.2020.02.035

Figure Lengend Snippet: (A, B) Three-dimensional ganglia volumes (yellow regions) (Supplemental Videos 5 and 6 are from these regions). To right of each image are quantitative data from that specific region. (C) Cell density based on five 20x fields/subject, 8 subjects (4 left, 4 right colon)), 24 right and 19 left colon ganglia volumes, 5261 neurons and 16,915 glial cells. (D-M) Manual neuron and glia counts were obtained after HuC/D (blue), S100β (green) and PHOX2B (red) staining. (D,I) Flattened Z-stacks. (E-H,J-M) Single slices and channels from Z-stack. (N,O) To estimate cell density over large regions we multiplied density within small regions (like Figure 2C) by percentage of bowel with myenteric plexus (using images like 2A). We found little variability in cell density within ganglia, indicated by tight data clusters in individuals. Inter-individual differences primarily reflect percentage of bowel occupied by ganglia in each individual. (A,B,D,I) Scale bars=100 μm. (E,F,G,H,J,K,L,M) Use (E) scale bar=25 μm.

Article Snippet: Zeiss LSM 710 confocal microscope (10x and 20x Plan-Apochromat objectives, Zeiss Zen software (version 2.3 14.0.14.201)) Z-axis increments were 4μm (10x objective) or 1μm (20x objective).

Techniques: Staining